Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Shisa8J3QNX5 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
Shisa8J3QNX5 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC16.64■□□□□ 0.25
Shisa8J3QNX5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Shisa8J3QNX5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Shisa8J3QNX5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Shisa8J3QNX5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Gm11421-201ENSMUST00000122124 294 ntBASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Smad6-203ENSMUST00000179458 273 ntBASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.6■□□□□ 0.25
Shisa8J3QNX5 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Shisa8J3QNX5 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms