Protein–RNA interactions for Protein: J3QMQ6

Gm3336, Predicted gene 3336, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3336J3QMQ6 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gm3336J3QMQ6 Gm11249-201ENSMUST00000117071 859 ntBASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Trmt13-210ENSMUST00000198454 880 ntBASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gm3336J3QMQ6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gm3336J3QMQ6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Gm3336J3QMQ6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Gm11927-201ENSMUST00000118472 759 ntBASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.8■□□□□ 0.6
Gm3336J3QMQ6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Gm3336J3QMQ6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Gm20760-201ENSMUST00000179197 648 ntBASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Gm3336J3QMQ6 Flg-201ENSMUST00000050758 1488 ntBASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Zfp783-201ENSMUST00000095946 670 ntBASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Gm3336J3QMQ6 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.77■□□□□ 0.59
Gm3336J3QMQ6 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Gm3336J3QMQ6 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Gm3336J3QMQ6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms