Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Gm42642-201ENSMUST00000200683 355 ntBASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Chrna9G3X8Z7 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Chrna9G3X8Z7 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC19.66■□□□□ 0.74
Chrna9G3X8Z7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 AV356131-201ENSMUST00000206201 750 ntBASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Gm5874-201ENSMUST00000096101 508 ntBASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Chrna9G3X8Z7 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Chrna9G3X8Z7 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.64■□□□□ 0.74
Chrna9G3X8Z7 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Gm10849-201ENSMUST00000100397 618 ntBASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Gm18671-201ENSMUST00000214826 683 ntBASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.64■□□□□ 0.73
Chrna9G3X8Z7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Gm26571-201ENSMUST00000181399 666 ntBASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Chrna9G3X8Z7 Fcho2-208ENSMUST00000224992 2964 ntBASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Chrna9G3X8Z7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna9G3X8Z7 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.61■□□□□ 0.73
Chrna9G3X8Z7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Chrna9G3X8Z7 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms