Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Gm12439-201ENSMUST00000117162 365 ntBASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Gm16061-201ENSMUST00000122167 857 ntBASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkx1-1G3UXB3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkx1-1G3UXB3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkx1-1G3UXB3 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm11594-201ENSMUST00000122313 162 ntBASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm18195-201ENSMUST00000207604 706 ntBASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC20.71■□□□□ 0.91
Nkx1-1G3UXB3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Gm10576-201ENSMUST00000191927 825 ntBASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.7■□□□□ 0.9
Nkx1-1G3UXB3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms