Protein–RNA interactions for Protein: E9Q555

Rnf213, E3 ubiquitin-protein ligase RNF213, mousemouse

Known RBP Predictions only

Length 5,152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf213E9Q555 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rnf213E9Q555 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Rnf213E9Q555 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Rnf213E9Q555 Mir1668-201ENSMUST00000184114 107 ntBASIC8.92□□□□□ -0.98
Rnf213E9Q555 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Rnf213E9Q555 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC8.92□□□□□ -0.98
Rnf213E9Q555 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Rnf213E9Q555 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Birc2-201ENSMUST00000054878 378 ntBASIC8.91□□□□□ -0.98
Rnf213E9Q555 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC8.91□□□□□ -0.98
Rnf213E9Q555 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gm43353-201ENSMUST00000199224 1295 ntBASIC8.91□□□□□ -0.98
Rnf213E9Q555 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Rnf213E9Q555 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Gm7370-201ENSMUST00000219471 767 ntBASIC8.9□□□□□ -0.98
Rnf213E9Q555 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Rnf213E9Q555 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Snhg20-203ENSMUST00000182811 2153 ntBASIC8.9□□□□□ -0.99
Rnf213E9Q555 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Rnf213E9Q555 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Gm16061-201ENSMUST00000122167 857 ntBASIC8.89□□□□□ -0.99
Rnf213E9Q555 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Rnf213E9Q555 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms