Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Col6a3E9PWQ3 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Gm38027-201ENSMUST00000192315 235 ntBASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a3E9PWQ3 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Col6a3E9PWQ3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.42■□□□□ 0.54
Col6a3E9PWQ3 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Gm18195-201ENSMUST00000207604 706 ntBASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a3E9PWQ3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC18.4■□□□□ 0.54
Col6a3E9PWQ3 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col6a3E9PWQ3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Col6a3E9PWQ3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
Col6a3E9PWQ3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Gm2756-201ENSMUST00000195851 400 ntBASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a3E9PWQ3 Gm11452-201ENSMUST00000122376 690 ntBASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Zfp783-201ENSMUST00000095946 670 ntBASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col6a3E9PWQ3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms