Protein–RNA interactions for Protein: D3YXK1

Samd1, Atherin, mousemouse

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd1D3YXK1 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.67■□□□□ 0.9
Samd1D3YXK1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Samd1D3YXK1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Samd1D3YXK1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Samd1D3YXK1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.65■□□□□ 0.9
Samd1D3YXK1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.65■□□□□ 0.9
Samd1D3YXK1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Samd1D3YXK1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.64■□□□□ 0.9
Samd1D3YXK1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Samd1D3YXK1 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Samd1D3YXK1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Mir6236-201ENSMUST00000184437 123 ntBASIC20.64■□□□□ 0.89
Samd1D3YXK1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Samd1D3YXK1 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.64■□□□□ 0.89
Samd1D3YXK1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.63■□□□□ 0.89
Samd1D3YXK1 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.63■□□□□ 0.89
Samd1D3YXK1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Samd1D3YXK1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Samd1D3YXK1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samd1D3YXK1 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samd1D3YXK1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samd1D3YXK1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samd1D3YXK1 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Samd1D3YXK1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Samd1D3YXK1 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms