Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Gm10602-201ENSMUST00000098239 609 ntBASIC19.34■□□□□ 0.69
Rfx8D3YU81 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.34■□□□□ 0.69
Rfx8D3YU81 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Rfx8D3YU81 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx8D3YU81 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Rfx8D3YU81 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.33■□□□□ 0.68
Rfx8D3YU81 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.33■□□□□ 0.68
Rfx8D3YU81 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.33■□□□□ 0.68
Rfx8D3YU81 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx8D3YU81 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx8D3YU81 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rfx8D3YU81 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.33■□□□□ 0.68
Rfx8D3YU81 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Rfx8D3YU81 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.33■□□□□ 0.68
Rfx8D3YU81 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Rfx8D3YU81 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.32■□□□□ 0.68
Rfx8D3YU81 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.32■□□□□ 0.68
Rfx8D3YU81 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rfx8D3YU81 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rfx8D3YU81 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Rfx8D3YU81 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rfx8D3YU81 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rfx8D3YU81 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx8D3YU81 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx8D3YU81 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfx8D3YU81 Gm13148-201ENSMUST00000118892 745 ntBASIC19.29■□□□□ 0.68
Rfx8D3YU81 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rfx8D3YU81 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.29■□□□□ 0.68
Rfx8D3YU81 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rfx8D3YU81 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.29■□□□□ 0.68
Rfx8D3YU81 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfx8D3YU81 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms