Protein–RNA interactions for Protein: A1L0T3

Ssc4d, Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4dA1L0T3 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Ssc4dA1L0T3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ssc4dA1L0T3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ssc4dA1L0T3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ssc4dA1L0T3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ssc4dA1L0T3 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ssc4dA1L0T3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Gm15375-201ENSMUST00000119510 849 ntBASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ssc4dA1L0T3 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Ssc4dA1L0T3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Mir7071-201ENSMUST00000184847 69 ntBASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Ssc4dA1L0T3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.61■□□□□ 0.41
Ssc4dA1L0T3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Ssc4dA1L0T3 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.61■□□□□ 0.41
Ssc4dA1L0T3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms