Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav12-1A0N8R1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Gm45417-201ENSMUST00000209533 758 ntBASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav12-1A0N8R1 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav12-1A0N8R1 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Tgds-204ENSMUST00000228543 1594 ntBASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav12-1A0N8R1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Gm13146-201ENSMUST00000118508 780 ntBASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav12-1A0N8R1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav12-1A0N8R1 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.22■□□□□ 0.03
Trav12-1A0N8R1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav12-1A0N8R1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Trav12-1A0N8R1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-1A0N8R1 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav12-1A0N8R1 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav12-1A0N8R1 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms