Protein–RNA interactions for Protein: A0A140T8K2

Rpl13a-ps1, Ribosomal protein 13A, pseudogene 1, mousemouse

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13a-ps1A0A140T8K2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Dio3-201ENSMUST00000097228 1449 ntBASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Gm44549-201ENSMUST00000208351 577 ntBASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rpl13a-ps1A0A140T8K2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Rpl13a-ps1A0A140T8K2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms