Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Reep4-203ENSMUST00000226563 1444 ntBASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Grk6-206ENSMUST00000224995 2971 ntBASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ccdc194A0A140LIT1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ccdc194A0A140LIT1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.18■□□□□ 0.5
Ccdc194A0A140LIT1 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ccdc194A0A140LIT1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Gm13146-201ENSMUST00000118508 780 ntBASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ccdc194A0A140LIT1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.15■□□□□ 0.5
Ccdc194A0A140LIT1 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ccdc194A0A140LIT1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.13■□□□□ 0.49
Ccdc194A0A140LIT1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc194A0A140LIT1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Ccdc194A0A140LIT1 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc194A0A140LIT1 Gm13234-201ENSMUST00000120010 747 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms