Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 AV356131-201ENSMUST00000206201 750 ntBASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.47■□□□□ 0.23
Pcdhgb8A0A140LI48 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhgb8A0A140LI48 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhgb8A0A140LI48 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhgb8A0A140LI48 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhgb8A0A140LI48 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhgb8A0A140LI48 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm9988-201ENSMUST00000069786 435 ntBASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhgb8A0A140LI48 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgb8A0A140LI48 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhgb8A0A140LI48 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms