Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trbv29A0A0G2LB96 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Fst-202ENSMUST00000223640 2612 ntBASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trbv29A0A0G2LB96 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Gm6139-201ENSMUST00000079261 882 ntBASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv29A0A0G2LB96 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv29A0A0G2LB96 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv29A0A0G2LB96 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 Gm27454-201ENSMUST00000185090 204 ntBASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trbv29A0A0G2LB96 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms