Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tgds-204ENSMUST00000228543 1594 ntBASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10129-202ENSMUST00000193100 1316 ntBASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 AC131586.2-201ENSMUST00000228370 1512 ntBASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms