Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm8770-201ENSMUST00000121113 1109 ntBASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-4A0A0G2JG37 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC12.52□□□□□ -0.41
Trav9d-4A0A0G2JG37 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav9d-4A0A0G2JG37 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm22238-201ENSMUST00000175222 88 ntBASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-4A0A0G2JG37 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Serp2-204ENSMUST00000228055 705 ntBASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gm9959-201ENSMUST00000068277 390 ntBASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-4A0A0G2JG37 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms