Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav23A0A0G2JG17 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Trav23A0A0G2JG17 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Mir5133-201ENSMUST00000174955 77 ntBASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Gm6365-201ENSMUST00000054711 744 ntBASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav23A0A0G2JG17 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav23A0A0G2JG17 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav23A0A0G2JG17 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Gm12933-201ENSMUST00000120203 872 ntBASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav23A0A0G2JG17 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav23A0A0G2JG17 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav23A0A0G2JG17 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav23A0A0G2JG17 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav23A0A0G2JG17 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms