Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trbv19A0A0B4J1H4 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.67□□□□□ -0.06
Trbv19A0A0B4J1H4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.66□□□□□ -0.06
Trbv19A0A0B4J1H4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 AC107452.1-201ENSMUST00000227963 481 ntBASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trbv19A0A0B4J1H4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm42778-201ENSMUST00000199644 553 ntBASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trbv19A0A0B4J1H4 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trbv19A0A0B4J1H4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms