Protein–RNA interactions for Protein: A0A0A6YYE3

Trbv15, T cell receptor beta, variable 15 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv15A0A0A6YYE3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv15A0A0A6YYE3 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trbv15A0A0A6YYE3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Gm45244-201ENSMUST00000211328 2200 ntBASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trbv15A0A0A6YYE3 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trbv15A0A0A6YYE3 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm12251-201ENSMUST00000117893 792 ntBASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm11421-201ENSMUST00000122124 294 ntBASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trbv15A0A0A6YYE3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm8309-201ENSMUST00000206627 1448 ntBASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trbv15A0A0A6YYE3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Gm10167-201ENSMUST00000150411 1479 ntBASIC15.12■□□□□ 0.01
Trbv15A0A0A6YYE3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms