Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv3A0A0A6YYE2 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv3A0A0A6YYE2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm7417-201ENSMUST00000192950 473 ntBASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.09□□□□□ -0.15
Trbv3A0A0A6YYE2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Trbv3A0A0A6YYE2 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm7860-201ENSMUST00000121190 879 ntBASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trbv3A0A0A6YYE2 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trbv3A0A0A6YYE2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv3A0A0A6YYE2 Tgds-204ENSMUST00000228543 1594 ntBASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms