Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Zcchc6-207ENSMUST00000225576 2499 ntBASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv23A0A0A6YWQ1 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv23A0A0A6YWQ1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm43672-201ENSMUST00000199072 1731 ntBASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm43173-201ENSMUST00000202246 593 ntBASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm43017-201ENSMUST00000198296 752 ntBASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv23A0A0A6YWQ1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.67■□□□□ 0.1
Trbv23A0A0A6YWQ1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Smad6-203ENSMUST00000179458 273 ntBASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.66■□□□□ 0.1
Trbv23A0A0A6YWQ1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms