Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm5812-201ENSMUST00000061073 957 ntBASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav6d-5A0A075B6B9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm15546-201ENSMUST00000122095 826 ntBASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav6d-5A0A075B6B9 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav6d-5A0A075B6B9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm12922-201ENSMUST00000120626 809 ntBASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm27801-201ENSMUST00000184174 223 ntBASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.73□□□□□ -0.05
Trav6d-5A0A075B6B9 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav6d-5A0A075B6B9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms