Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6-5A0A075B6B5 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-5A0A075B6B5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-5A0A075B6B5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-5A0A075B6B5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-5A0A075B6B5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-5A0A075B6B5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-5A0A075B6B5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-5A0A075B6B5 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-5A0A075B6B5 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms