Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Gm20100-201ENSMUST00000209418 2272 ntBASIC13.59□□□□□ -0.23
Trav6n-6A0A075B6B2 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6n-6A0A075B6B2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav6n-6A0A075B6B2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm43173-201ENSMUST00000202246 593 ntBASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav6n-6A0A075B6B2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm12251-201ENSMUST00000117893 792 ntBASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm26833-201ENSMUST00000180899 440 ntBASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav6n-6A0A075B6B2 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm15039-201ENSMUST00000118914 875 ntBASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm11421-201ENSMUST00000122124 294 ntBASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Gm43017-201ENSMUST00000198296 752 ntBASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav6n-6A0A075B6B2 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms