Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Reep4-203ENSMUST00000226563 1444 ntBASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav5-4A0A075B652 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav5-4A0A075B652 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trav5-4A0A075B652 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav5-4A0A075B652 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav5-4A0A075B652 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.21■□□□□ 0.03
Trav5-4A0A075B652 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms