Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm9194-201ENSMUST00000220749 1447 ntBASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Mir7075-201ENSMUST00000184187 82 ntBASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Wdr70-203ENSMUST00000227371 1130 ntBASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav15d-1-dv6d-1A0A075B624 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav15d-1-dv6d-1A0A075B624 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms