Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav16d-dv11A0A075B617 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.44□□□□□ -0.26
Trav16d-dv11A0A075B617 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm5921-201ENSMUST00000075898 882 ntBASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav16d-dv11A0A075B617 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav16d-dv11A0A075B617 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav16d-dv11A0A075B617 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav16d-dv11A0A075B617 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 194.4 ms