Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav5-1A0A075B5Z7 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trav5-1A0A075B5Z7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-1A0A075B5Z7 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Trav5-1A0A075B5Z7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav5-1A0A075B5Z7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav5-1A0A075B5Z7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm11249-201ENSMUST00000117071 859 ntBASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm13158-201ENSMUST00000122007 736 ntBASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav5-1A0A075B5Z7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Rncr4-201ENSMUST00000194541 2234 ntBASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm11927-201ENSMUST00000118472 759 ntBASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Zfp783-201ENSMUST00000095946 670 ntBASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trav5-1A0A075B5Z7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Gm9885-202ENSMUST00000186234 2209 ntBASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav5-1A0A075B5Z7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms