Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm15093-201ENSMUST00000179021 2022 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm15681-201ENSMUST00000137501 2704 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Olfr1220-203ENSMUST00000213288 4223 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Cdc40Q9DC48 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Igkv1-122-201ENSMUST00000103314 383 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm25877-201ENSMUST00000104326 129 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm14893-201ENSMUST00000117904 282 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm5843-201ENSMUST00000121631 476 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm8609-201ENSMUST00000182967 998 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm36935-201ENSMUST00000192526 292 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 AC099934.1-201ENSMUST00000200493 79 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm8168-201ENSMUST00000209631 948 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 AC123533.2-201ENSMUST00000228176 375 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Cdc40Q9DC48 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Cyp2c69-201ENSMUST00000168838 1770 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Mir760-201ENSMUST00000103257 119 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm11889-201ENSMUST00000118402 1079 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm13438-201ENSMUST00000120100 573 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm12929-201ENSMUST00000122406 370 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm12504-202ENSMUST00000148026 306 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Gm24155-201ENSMUST00000175259 110 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.36□□□□□ -1.39
Cdc40Q9DC48 Mir7033-201ENSMUST00000184259 81 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms