Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm6181-201ENSMUST00000117187 264 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm12601-201ENSMUST00000118994 846 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm9208-201ENSMUST00000120468 948 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm7481-201ENSMUST00000182020 995 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm28006-201ENSMUST00000183841 122 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm5261-201ENSMUST00000185860 713 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm37996-201ENSMUST00000191859 367 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm20690-202ENSMUST00000195126 355 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm42696-201ENSMUST00000199859 1142 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 A230098N10Rik-202ENSMUST00000200055 356 ntTSL 2 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm45319-201ENSMUST00000210220 318 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm8679-201ENSMUST00000210651 1036 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 AC140267.1-201ENSMUST00000226485 213 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 AC144772.2-201ENSMUST00000228830 2859 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC7.46□□□□□ -1.22
Ddx56Q9D0R4 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm42653-201ENSMUST00000200644 2839 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm7091-201ENSMUST00000116438 586 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm15739-201ENSMUST00000118049 872 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Rps8-ps3-201ENSMUST00000121011 650 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Smim26-201ENSMUST00000136628 471 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm24363-201ENSMUST00000158440 311 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm23139-201ENSMUST00000179454 132 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm27156-201ENSMUST00000184589 754 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm18501-201ENSMUST00000185363 664 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Mrgprc3-ps-201ENSMUST00000189876 955 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm2429-201ENSMUST00000194635 586 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm3321-201ENSMUST00000200603 1129 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm43531-201ENSMUST00000200676 1114 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 AC151901.1-201ENSMUST00000218274 180 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gm33467-201ENSMUST00000221885 652 ntTSL 3 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 AC140451.1-201ENSMUST00000227984 737 ntBASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 Olfr688-201ENSMUST00000098155 966 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Ddx56Q9D0R4 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms