Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm14796-201ENSMUST00000121216 959 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm5843-201ENSMUST00000121631 476 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm2735-201ENSMUST00000136133 277 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm28416-201ENSMUST00000188334 292 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm37383-201ENSMUST00000191750 745 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm35108-201ENSMUST00000194321 699 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm33191-201ENSMUST00000195604 699 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm43546-201ENSMUST00000196721 943 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 AC151967.1-201ENSMUST00000198146 76 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm42713-201ENSMUST00000202709 945 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm43926-201ENSMUST00000203978 430 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm45136-201ENSMUST00000205793 943 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 AC108846.4-201ENSMUST00000216783 341 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Olfr429-201ENSMUST00000060693 943 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Klf5-202ENSMUST00000226784 2852 ntBASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.68□□□□□ -1.18
Smc1aQ9CU62 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm42763-201ENSMUST00000199595 2087 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm18508-201ENSMUST00000215790 1642 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm43229-201ENSMUST00000201812 1850 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm6987-201ENSMUST00000119319 428 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm14863-201ENSMUST00000119648 307 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm27156-201ENSMUST00000184589 754 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm29605-201ENSMUST00000190800 292 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm43929-201ENSMUST00000203025 409 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm46424-201ENSMUST00000221567 168 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm18960-201ENSMUST00000222962 713 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm12346-201ENSMUST00000121455 2255 ntBASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.67□□□□□ -1.18
Smc1aQ9CU62 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm37429-201ENSMUST00000193807 1799 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm43285-201ENSMUST00000196563 3592 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm44769-201ENSMUST00000206120 2809 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm22781-201ENSMUST00000104083 137 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm12939-201ENSMUST00000117303 165 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm14787-201ENSMUST00000121236 388 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm13282-201ENSMUST00000121577 545 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm26480-201ENSMUST00000122619 297 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 1110038B12Rik-201ENSMUST00000172501 579 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm26528-201ENSMUST00000181965 283 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 Gm27014-201ENSMUST00000182658 937 ntBASIC7.66□□□□□ -1.18
Smc1aQ9CU62 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms