Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 AY512931-201ENSMUST00000139751 2395 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Atp2b4-201ENSMUST00000048953 8292 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm23485-201ENSMUST00000104181 155 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm11902-201ENSMUST00000118849 270 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm14375-201ENSMUST00000119490 855 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm10913-201ENSMUST00000133732 463 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm11963-201ENSMUST00000149826 500 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm25969-201ENSMUST00000157166 132 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm17212-201ENSMUST00000166666 259 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Mir124-2hg-201ENSMUST00000185804 3844 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm29354-201ENSMUST00000187613 696 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm7266-201ENSMUST00000187999 405 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm29141-201ENSMUST00000190357 882 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm36965-201ENSMUST00000193797 394 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm2221-201ENSMUST00000209342 418 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm8637-201ENSMUST00000212919 1085 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm3800-201ENSMUST00000221086 554 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 AC122533.1-201ENSMUST00000225177 767 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 AC114572.1-201ENSMUST00000227262 300 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm13769-201ENSMUST00000077123 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Sirpb1b-201ENSMUST00000091319 1499 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.07□□□□□ -1.44
Scrt1Q99M85 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Scrt1Q99M85 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm23748-201ENSMUST00000104227 131 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm12790-201ENSMUST00000106916 951 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm15310-201ENSMUST00000117891 372 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm4342-201ENSMUST00000118982 367 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm11553-201ENSMUST00000120682 240 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm26169-201ENSMUST00000158420 135 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm22530-201ENSMUST00000158820 118 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Mir7072-201ENSMUST00000184542 60 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm17965-201ENSMUST00000193904 517 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm7166-201ENSMUST00000199715 303 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Klf5-202ENSMUST00000226784 2852 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms