Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 AC122295.1-201ENSMUST00000223476 388 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Olfr683-201ENSMUST00000061284 960 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 AC153881.3-201ENSMUST00000218494 1561 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 CT009734.1-201ENSMUST00000227657 1687 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Kalrn-204ENSMUST00000114949 3618 ntTSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm44835-201ENSMUST00000205544 3181 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Vmn1r51-203ENSMUST00000226542 4164 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm12635-201ENSMUST00000117285 752 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm13260-201ENSMUST00000117797 1264 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm15913-201ENSMUST00000118492 331 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm14589-201ENSMUST00000121640 727 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm22533-201ENSMUST00000158821 274 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm25690-201ENSMUST00000175439 77 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm28859-201ENSMUST00000186650 616 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm21617-201ENSMUST00000188297 691 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm6445-201ENSMUST00000189515 1112 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm38373-201ENSMUST00000192042 288 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm4585-201ENSMUST00000207218 452 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 AC174678.3-201ENSMUST00000227568 362 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm9985-201ENSMUST00000044101 510 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 AC154747.4-203ENSMUST00000225893 1384 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Ash1l-202ENSMUST00000186583 11644 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Hmgcs1-202ENSMUST00000224188 3464 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Gm37783-201ENSMUST00000192025 1856 ntBASIC8.04□□□□□ -1.12
Clp1Q99LI9 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 6330549D23Rik-203ENSMUST00000160818 3228 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Clp1Q99LI9 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Clp1Q99LI9 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.03□□□□□ -1.12
Clp1Q99LI9 Gm44802-201ENSMUST00000208026 1916 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms