Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm37278-201ENSMUST00000191619 2872 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm25757-201ENSMUST00000103986 123 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm23437-201ENSMUST00000104036 127 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm8624-201ENSMUST00000118083 432 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm14158-201ENSMUST00000118409 308 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 BC064078-201ENSMUST00000122939 570 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm16284-201ENSMUST00000140995 400 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm23031-201ENSMUST00000157998 119 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm18593-201ENSMUST00000200754 1139 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm43929-201ENSMUST00000203025 409 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm2221-201ENSMUST00000209342 418 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm19238-201ENSMUST00000221936 1260 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 AC161877.2-201ENSMUST00000226248 545 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm18248-201ENSMUST00000191164 1846 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm18508-201ENSMUST00000215790 1642 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm28240-201ENSMUST00000187560 2053 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.61□□□□□ -1.35
Cstf3Q99LI7 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm21955-201ENSMUST00000194137 4968 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Wnk1-218ENSMUST00000161512 1426 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 1700014D04Rik-203ENSMUST00000180139 3231 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Mir688-201ENSMUST00000102055 75 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gip-202ENSMUST00000103157 652 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Mrpl48-ps-201ENSMUST00000121413 636 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm12630-201ENSMUST00000121575 784 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm16107-201ENSMUST00000162523 862 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm7244-201ENSMUST00000164658 455 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm5300-201ENSMUST00000182201 1003 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Mir7011-201ENSMUST00000183768 73 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm27617-201ENSMUST00000184321 168 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Mir6972-201ENSMUST00000184774 64 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Smpx-208ENSMUST00000190091 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm3841-201ENSMUST00000191399 451 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Trbv27-201ENSMUST00000193711 277 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm8539-201ENSMUST00000199822 501 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm4605-201ENSMUST00000203148 625 ntBASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.6□□□□□ -1.35
Cstf3Q99LI7 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms