Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm765-201ENSMUST00000164491 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.42□□□□□ -1.54
Nup35Q8R4R6 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 AC161247.1-201ENSMUST00000217744 2295 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm11282-201ENSMUST00000119018 1416 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Rfx4-203ENSMUST00000095388 3274 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm22707-201ENSMUST00000103834 110 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm22710-201ENSMUST00000116892 125 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm12817-201ENSMUST00000119622 610 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm13163-201ENSMUST00000119875 336 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm12094-201ENSMUST00000121781 472 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm23822-201ENSMUST00000158739 128 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm8893-201ENSMUST00000172146 1242 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 n-R5s109-201ENSMUST00000179195 119 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm18848-201ENSMUST00000182069 792 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm27001-201ENSMUST00000182252 936 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm27970-201ENSMUST00000184854 407 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm29650-201ENSMUST00000188485 742 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm29168-201ENSMUST00000189953 687 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm44225-201ENSMUST00000203582 186 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm18060-201ENSMUST00000207407 564 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm32443-201ENSMUST00000217880 707 ntTSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm10126-201ENSMUST00000221732 168 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm5374-202ENSMUST00000222910 314 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 AL844586.1-201ENSMUST00000224297 1042 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm9837-201ENSMUST00000057722 731 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Mir135a-1-201ENSMUST00000083473 90 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm42597-201ENSMUST00000196663 1544 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Olfr286-201ENSMUST00000073612 3821 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 Ncl-201ENSMUST00000027438 8202 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Nup35Q8R4R6 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Gm32568-201ENSMUST00000212782 1421 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Zfp184-201ENSMUST00000006903 2214 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 AC131687.1-201ENSMUST00000225931 5446 ntBASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Robo2-210ENSMUST00000226478 8059 ntBASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 AC187103.1-201ENSMUST00000224641 1475 ntBASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Nup35Q8R4R6 Il15ra-213ENSMUST00000135341 1545 ntTSL 3 BASIC5.4□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms