Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Gm45061-201ENSMUST00000204395 2095 ntBASIC8.06□□□□□ -1.12
Vps53Q8CCB4 Rs1-201ENSMUST00000033650 5840 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm25379-201ENSMUST00000104338 114 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Olfr602-ps1-201ENSMUST00000118403 948 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm27014-201ENSMUST00000182658 937 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Mir7033-201ENSMUST00000184259 81 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm36935-201ENSMUST00000192526 292 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 AC099760.1-201ENSMUST00000196300 153 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm44971-201ENSMUST00000206192 337 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm34424-201ENSMUST00000213400 782 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm18960-201ENSMUST00000222962 713 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm18955-201ENSMUST00000223173 649 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 AC116596.2-203ENSMUST00000227345 731 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 n-R5s169-201ENSMUST00000083110 120 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Mup8-201ENSMUST00000095058 925 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm45174-201ENSMUST00000208884 3065 ntBASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Pcdh15-234ENSMUST00000191854 9104 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Vps53Q8CCB4 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm43497-201ENSMUST00000201137 2316 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm22781-201ENSMUST00000104083 137 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm13732-201ENSMUST00000117753 535 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm14353-201ENSMUST00000122200 869 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm26480-201ENSMUST00000122619 297 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm22223-201ENSMUST00000157360 125 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm26323-201ENSMUST00000157743 175 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm20530-201ENSMUST00000174261 254 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Trbv9-201ENSMUST00000194494 290 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm43656-201ENSMUST00000197882 434 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm1969-201ENSMUST00000198125 1220 ntBASIC8.04□□□□□ -1.12
Vps53Q8CCB4 Gm43063-201ENSMUST00000198198 1081 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms