Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Mir6367-201ENSMUST00000183385 102 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm27186-201ENSMUST00000184223 307 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm21054-201ENSMUST00000203981 380 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm18012-201ENSMUST00000204558 773 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gm9267-201ENSMUST00000222831 404 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 AC091237.1-201ENSMUST00000224911 637 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Atg4aQ8C9S8 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Nsrp1-201ENSMUST00000102494 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Olfr195-202ENSMUST00000216957 2077 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Gm43022-201ENSMUST00000197067 4268 ntBASIC8.15□□□□□ -1.11
Atg4aQ8C9S8 Gm36908-201ENSMUST00000218080 1662 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm44231-201ENSMUST00000204106 4075 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Zfp626-202ENSMUST00000205671 5329 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm15950-201ENSMUST00000162902 1973 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm25093-201ENSMUST00000103993 132 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm6434-201ENSMUST00000163316 372 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm27185-201ENSMUST00000184296 247 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 1700016L21Rik-201ENSMUST00000187497 394 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm32983-201ENSMUST00000208500 505 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm6575-201ENSMUST00000222946 697 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm9985-201ENSMUST00000044101 510 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm24036-201ENSMUST00000082868 156 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Mir196a-1-201ENSMUST00000083612 102 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm43128-201ENSMUST00000202212 1621 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm21846-201ENSMUST00000179257 3073 ntBASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Atg4aQ8C9S8 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 AC156636.1-201ENSMUST00000218639 2229 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Mir708-201ENSMUST00000102189 109 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Iglc2-201ENSMUST00000103749 606 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm11972-201ENSMUST00000118514 389 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm7746-201ENSMUST00000120966 503 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm8089-201ENSMUST00000122463 968 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm3585-201ENSMUST00000173438 875 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gtpbp4-ps3-201ENSMUST00000184093 136 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm37637-201ENSMUST00000195540 1256 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm20128-201ENSMUST00000196189 417 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm43176-201ENSMUST00000199653 2989 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 AC123917.1-201ENSMUST00000228063 1048 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Scp2d1-201ENSMUST00000028918 760 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Cep97-201ENSMUST00000023270 7911 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm45528-201ENSMUST00000209854 3145 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Fam13a-201ENSMUST00000089860 5786 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm6811-201ENSMUST00000169389 1533 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Atg4aQ8C9S8 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms