Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Naip1-204ENSMUST00000222155 5361 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm37663-201ENSMUST00000191887 2299 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Rian-209ENSMUST00000182406 3476 ntBASIC8.83□□□□□ -1
Col16a1Q8BLX7 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Gm27048-201ENSMUST00000182891 4627 ntTSL 1 (best) BASIC8.83□□□□□ -1
Col16a1Q8BLX7 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm24888-201ENSMUST00000104387 130 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Mir466j-201ENSMUST00000116876 122 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm23259-201ENSMUST00000158318 303 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm29197-201ENSMUST00000185922 702 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm43354-201ENSMUST00000196862 346 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 AC170086.2-201ENSMUST00000224733 803 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 CT571245.1-201ENSMUST00000218642 3465 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Skp2-202ENSMUST00000110585 6185 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm6494-201ENSMUST00000218604 2298 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Olfr224-204ENSMUST00000217009 2098 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm24733-201ENSMUST00000158863 253 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm22548-201ENSMUST00000174899 78 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm23632-201ENSMUST00000175289 125 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Mir6952-201ENSMUST00000185092 61 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm18839-201ENSMUST00000204292 670 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm4510-201ENSMUST00000218265 427 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Snora44-201ENSMUST00000082670 129 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC8.82□□□□□ -1
Col16a1Q8BLX7 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.82□□□□□ -1
Col16a1Q8BLX7 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm43873-201ENSMUST00000204505 3938 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Adgrl2-202ENSMUST00000106128 6052 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm37647-201ENSMUST00000194556 3143 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm12608-201ENSMUST00000122013 1715 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm7745-201ENSMUST00000182235 973 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm9517-201ENSMUST00000195021 874 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC8.81□□□□□ -1
Col16a1Q8BLX7 AC154431.2-201ENSMUST00000225215 1055 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 AC154634.2-201ENSMUST00000225983 1184 ntBASIC8.81□□□□□ -1
Col16a1Q8BLX7 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col16a1Q8BLX7 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 92.4 ms