Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Gm44044-201ENSMUST00000205178 1089 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Gm29759-201ENSMUST00000205860 327 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Gm18781-201ENSMUST00000211252 924 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 AC168062.1-201ENSMUST00000228048 769 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Gm42613-201ENSMUST00000199975 1931 ntBASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Trim43aQ3TL54 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gpr22-203ENSMUST00000176710 1772 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 AC154642.2-201ENSMUST00000223657 2485 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Thap6-201ENSMUST00000191860 3151 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm44039-201ENSMUST00000204192 2246 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm8534-201ENSMUST00000118553 766 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm8421-201ENSMUST00000119439 305 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm12321-201ENSMUST00000121485 804 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm7244-201ENSMUST00000164658 455 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm17205-201ENSMUST00000168370 1207 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm28958-201ENSMUST00000185864 703 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm29343-201ENSMUST00000187887 842 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm30708-201ENSMUST00000202183 312 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm45509-201ENSMUST00000209624 1229 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm7419-201ENSMUST00000209962 925 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 AC160114.3-201ENSMUST00000222256 560 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 AC131029.2-203ENSMUST00000228116 1244 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm5436-201ENSMUST00000058103 643 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Gm43577-201ENSMUST00000197090 3344 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Trim43aQ3TL54 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 AC130217.2-201ENSMUST00000224009 2990 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Zfp607a-202ENSMUST00000205534 3511 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm42940-201ENSMUST00000200361 2362 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm13222-201ENSMUST00000119638 138 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm26480-201ENSMUST00000122619 297 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm18848-201ENSMUST00000182069 792 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm9167-201ENSMUST00000182469 962 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm28492-201ENSMUST00000190899 1019 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Gm45514-201ENSMUST00000211531 689 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 AC133598.2-201ENSMUST00000224302 624 ntBASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Bglap3-201ENSMUST00000075523 717 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Trim43aQ3TL54 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms