Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm44178-201ENSMUST00000205229 2930 ntBASIC7.35□□□□□ -1.23
NcanP55066 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.35□□□□□ -1.23
NcanP55066 Rsrc2-219ENSMUST00000182955 1685 ntTSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gm42837-201ENSMUST00000197071 2829 ntBASIC7.35□□□□□ -1.23
NcanP55066 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.35□□□□□ -1.23
NcanP55066 Rnu11-201ENSMUST00000104135 134 ntBASIC7.35□□□□□ -1.23
NcanP55066 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC7.35□□□□□ -1.23
NcanP55066 Gm14512-201ENSMUST00000117924 230 ntBASIC7.35□□□□□ -1.23
NcanP55066 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC7.35□□□□□ -1.23
NcanP55066 Gm15781-201ENSMUST00000120216 323 ntBASIC7.35□□□□□ -1.23
NcanP55066 Gm13493-201ENSMUST00000120318 493 ntBASIC7.35□□□□□ -1.23
NcanP55066 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC7.35□□□□□ -1.23
NcanP55066 Mir3572-201ENSMUST00000175549 86 ntBASIC7.35□□□□□ -1.23
NcanP55066 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC7.35□□□□□ -1.23
NcanP55066 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC7.35□□□□□ -1.23
NcanP55066 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC7.35□□□□□ -1.23
NcanP55066 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.35□□□□□ -1.23
NcanP55066 AC192333.6-201ENSMUST00000224565 725 ntBASIC7.35□□□□□ -1.23
NcanP55066 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NcanP55066 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NcanP55066 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gm24695-201ENSMUST00000083877 83 ntBASIC7.35□□□□□ -1.23
NcanP55066 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.35□□□□□ -1.23
NcanP55066 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
NcanP55066 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Vwde-202ENSMUST00000203074 5626 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
NcanP55066 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
NcanP55066 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Gm2223-201ENSMUST00000112099 1350 ntBASIC7.34□□□□□ -1.23
NcanP55066 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC7.34□□□□□ -1.23
NcanP55066 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.34□□□□□ -1.23
NcanP55066 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
NcanP55066 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Gm13641-201ENSMUST00000117993 473 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm13983-201ENSMUST00000118018 865 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm13462-201ENSMUST00000121472 961 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC7.34□□□□□ -1.23
NcanP55066 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NcanP55066 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NcanP55066 Gm38181-201ENSMUST00000181357 720 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm27820-201ENSMUST00000183628 175 ntBASIC7.34□□□□□ -1.23
NcanP55066 Mir6417-201ENSMUST00000183815 116 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm28080-201ENSMUST00000188552 722 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm28455-201ENSMUST00000189105 1290 ntBASIC7.34□□□□□ -1.23
NcanP55066 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC7.34□□□□□ -1.23
NcanP55066 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 AC112956.1-201ENSMUST00000213563 492 ntBASIC7.34□□□□□ -1.23
NcanP55066 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 CT025616.1-201ENSMUST00000221158 412 ntBASIC7.34□□□□□ -1.23
NcanP55066 AC161586.1-201ENSMUST00000223232 547 ntBASIC7.34□□□□□ -1.23
NcanP55066 CT030238.4-203ENSMUST00000227343 836 ntBASIC7.34□□□□□ -1.23
NcanP55066 2310079G19Rik-201ENSMUST00000052337 881 ntAPPRIS P1 BASIC7.34□□□□□ -1.23
NcanP55066 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC7.34□□□□□ -1.23
NcanP55066 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
NcanP55066 Retreg1-203ENSMUST00000226438 2783 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms