Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22111-201ENSMUST00000178010 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm23687-201ENSMUST00000178664 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm24566-201ENSMUST00000179286 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm23305-201ENSMUST00000179342 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm26389-201ENSMUST00000179819 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm22130-201ENSMUST00000179979 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm22393-201ENSMUST00000180153 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm25085-201ENSMUST00000180298 79 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rfx1P48377 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm37349-201ENSMUST00000194205 624 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm5307-201ENSMUST00000204772 760 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC8.68□□□□□ -1.02
Rfx1P48377 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC8.68□□□□□ -1.02
Rfx1P48377 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm46436-201ENSMUST00000221851 1294 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 AC108945.1-201ENSMUST00000226477 94 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 AC154649.2-201ENSMUST00000228189 808 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm2531-201ENSMUST00000075609 512 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr1029-201ENSMUST00000082191 1061 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr5-201ENSMUST00000086318 1044 ntAPPRIS P1 TSL 3 BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr635-201ENSMUST00000098185 966 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rfx1P48377 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm6767-201ENSMUST00000118650 1381 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Rfx1P48377 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 BC035044-201ENSMUST00000160290 1568 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Vmn1r4-204ENSMUST00000227073 1695 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Rfx1P48377 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Olfr417-202ENSMUST00000217962 5662 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm8204-201ENSMUST00000185696 2144 ntBASIC8.68□□□□□ -1.02
Rfx1P48377 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC8.68□□□□□ -1.02
Rfx1P48377 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Rfx1P48377 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Rfx1P48377 Vmn2r57-201ENSMUST00000165029 2592 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm43728-201ENSMUST00000198817 2622 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rfx1P48377 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rfx1P48377 Ighv1-67-201ENSMUST00000103538 294 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm24071-201ENSMUST00000104520 132 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm7206-201ENSMUST00000117730 508 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm16007-201ENSMUST00000117837 286 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm13325-201ENSMUST00000118746 806 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm13808-201ENSMUST00000121353 184 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm11933-201ENSMUST00000121550 375 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm3160-201ENSMUST00000128343 607 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm25713-201ENSMUST00000158625 109 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Traj54-201ENSMUST00000165071 54 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm17038-201ENSMUST00000166586 494 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm8321-201ENSMUST00000181691 980 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm28934-201ENSMUST00000186491 346 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm28384-201ENSMUST00000189079 463 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm38166-201ENSMUST00000191660 471 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm37295-201ENSMUST00000192186 109 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm38029-201ENSMUST00000192669 2090 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rfx1P48377 Gm31306-201ENSMUST00000197517 508 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
Rfx1P48377 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC8.67□□□□□ -1.02
Rfx1P48377 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Gm4574-201ENSMUST00000207804 542 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Rfx1P48377 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.67□□□□□ -1.02
Rfx1P48377 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Rfx1P48377 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC8.67□□□□□ -1.02
Rfx1P48377 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Rfx1P48377 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.67□□□□□ -1.02
Rfx1P48377 AC133654.1-201ENSMUST00000228411 672 ntBASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms