Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm22992-201ENSMUST00000179496 121 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Gm25892-201ENSMUST00000179867 121 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Gm24092-201ENSMUST00000180257 121 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Gm19253-201ENSMUST00000204279 307 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Gm10688-201ENSMUST00000214985 520 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 AC117797.1-201ENSMUST00000223977 695 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Col18a1P39061 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
Col18a1P39061 Zfp970-201ENSMUST00000099002 794 ntTSL 2 BASIC8.96□□□□□ -0.97
Col18a1P39061 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 Gm904-201ENSMUST00000099519 649 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Hivep3-209ENSMUST00000166542 7253 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 AC164978.1-201ENSMUST00000228608 4011 ntBASIC8.96□□□□□ -0.97
Col18a1P39061 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 Stil-201ENSMUST00000030490 5285 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Med12l-206ENSMUST00000199659 11006 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Pcyt1b-201ENSMUST00000045898 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Col18a1P39061 Cdh23-205ENSMUST00000105464 11090 ntAPPRIS P2 TSL 5 BASIC8.96□□□□□ -0.97
Col18a1P39061 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col18a1P39061 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col18a1P39061 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Col18a1P39061 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
Col18a1P39061 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Col18a1P39061 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Col18a1P39061 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Col18a1P39061 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col18a1P39061 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Col18a1P39061 Mir706-201ENSMUST00000102262 84 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 n-R5s19-201ENSMUST00000122793 120 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm37684-201ENSMUST00000192779 355 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm6119-201ENSMUST00000193443 1206 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC8.96□□□□□ -0.98
Col18a1P39061 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Col18a1P39061 Gm44265-201ENSMUST00000203631 465 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm7825-201ENSMUST00000204046 416 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC8.96□□□□□ -0.98
Col18a1P39061 Gm2996-201ENSMUST00000211398 537 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm9088-201ENSMUST00000220237 508 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Gm9292-201ENSMUST00000222008 710 ntBASIC8.96□□□□□ -0.98
Col18a1P39061 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC8.95□□□□□ -0.98
Col18a1P39061 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC8.95□□□□□ -0.98
Col18a1P39061 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Brca2-201ENSMUST00000044620 10724 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Col18a1P39061 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm42852-201ENSMUST00000202649 1379 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm26079-201ENSMUST00000104066 133 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm15715-201ENSMUST00000118032 283 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm15171-201ENSMUST00000122191 334 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm3715-201ENSMUST00000172308 617 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm26570-201ENSMUST00000180672 342 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm9517-201ENSMUST00000195021 874 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm44902-201ENSMUST00000206177 805 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm18943-201ENSMUST00000207357 1216 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm44845-201ENSMUST00000208773 335 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 AC133650.1-201ENSMUST00000217243 578 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col18a1P39061 AC124709.3-201ENSMUST00000227294 171 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Gm24454-201ENSMUST00000083349 132 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col18a1P39061 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Col18a1P39061 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Sema6a-203ENSMUST00000115449 6815 ntTSL 5 BASIC8.95□□□□□ -0.98
Col18a1P39061 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.95□□□□□ -0.98
Col18a1P39061 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Lcorl-201ENSMUST00000016026 4884 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Col18a1P39061 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms