Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7991-201ENSMUST00000168668 591 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm6536-201ENSMUST00000171180 615 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Cers6-206ENSMUST00000176018 1279 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm21839-201ENSMUST00000179536 378 ntBASIC6.77□□□□□ -1.33
Lire1P11260 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Mir6340-201ENSMUST00000183857 119 ntBASIC6.77□□□□□ -1.33
Lire1P11260 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Gm18799-201ENSMUST00000189104 913 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm36961-201ENSMUST00000191980 132 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.77□□□□□ -1.33
Lire1P11260 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 AC134333.1-201ENSMUST00000204536 944 ntBASIC6.77□□□□□ -1.33
Lire1P11260 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 AC155834.1-201ENSMUST00000220033 498 ntBASIC6.77□□□□□ -1.33
Lire1P11260 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lire1P11260 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lire1P11260 Gm25587-201ENSMUST00000082498 166 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 AC166159.1-201ENSMUST00000227154 1380 ntBASIC6.77□□□□□ -1.33
Lire1P11260 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.77□□□□□ -1.33
Lire1P11260 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Lire1P11260 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Lire1P11260 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lire1P11260 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Lire1P11260 Mir669e-201ENSMUST00000117003 119 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Gm13552-201ENSMUST00000118837 417 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm14716-201ENSMUST00000120138 718 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm25780-201ENSMUST00000122528 253 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm28053-201ENSMUST00000127537 350 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm24442-201ENSMUST00000157238 327 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm24530-201ENSMUST00000157948 288 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm25048-201ENSMUST00000158598 91 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm20637-201ENSMUST00000175715 462 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm20690-201ENSMUST00000177341 315 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Mir7212-201ENSMUST00000184098 61 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Mir6987-201ENSMUST00000184789 73 ntBASIC6.76□□□□□ -1.33
Lire1P11260 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Ighv5-5-201ENSMUST00000193826 329 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC6.76□□□□□ -1.33
Lire1P11260 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lire1P11260 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lire1P11260 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lire1P11260 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm10123-201ENSMUST00000075723 490 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Gm24613-201ENSMUST00000083266 130 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Lire1P11260 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Lire1P11260 Gm42905-201ENSMUST00000196237 1611 ntBASIC6.76□□□□□ -1.33
Lire1P11260 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms