Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
Col1a1P11087 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
Col1a1P11087 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Col1a1P11087 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Vmn1r51-208ENSMUST00000227876 4160 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col1a1P11087 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC7.95□□□□□ -1.14
Col1a1P11087 Gm8192-201ENSMUST00000182196 958 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Gm43382-201ENSMUST00000198954 838 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Gm44221-201ENSMUST00000203552 388 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Gm45122-201ENSMUST00000206376 784 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Gm3266-201ENSMUST00000217832 591 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 4933433N18Rik-201ENSMUST00000222134 1220 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 AC164426.1-201ENSMUST00000225745 929 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC7.95□□□□□ -1.14
Col1a1P11087 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC7.95□□□□□ -1.14
Col1a1P11087 Gm43880-201ENSMUST00000203635 2162 ntBASIC7.95□□□□□ -1.14
Col1a1P11087 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col1a1P11087 Chil4-201ENSMUST00000082219 1539 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
Col1a1P11087 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Col1a1P11087 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Col1a1P11087 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC7.95□□□□□ -1.14
Col1a1P11087 Gm23739-201ENSMUST00000102295 108 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm14038-201ENSMUST00000121500 807 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm23740-201ENSMUST00000157385 100 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm9064-201ENSMUST00000163579 566 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm26570-201ENSMUST00000180672 342 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Col1a1P11087 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.94□□□□□ -1.14
Col1a1P11087 AC139197.1-201ENSMUST00000228332 813 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm15732-201ENSMUST00000079794 480 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
Col1a1P11087 Abca14-201ENSMUST00000084640 5384 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Crispld1-202ENSMUST00000159958 3117 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Pet2-201ENSMUST00000113959 4183 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Pet2-202ENSMUST00000113960 4182 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm37663-201ENSMUST00000191887 2299 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Col1a1P11087 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm26455-201ENSMUST00000175300 92 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm27849-201ENSMUST00000183673 125 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms