Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm12174-201ENSMUST00000119853 813 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm8080-201ENSMUST00000122046 1155 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm24680-201ENSMUST00000158759 126 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm23139-201ENSMUST00000179454 132 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm9541-201ENSMUST00000188409 502 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm37996-201ENSMUST00000191859 367 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm37173-201ENSMUST00000194498 1017 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm37526-201ENSMUST00000194640 619 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm43036-201ENSMUST00000200594 373 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 AC164424.1-201ENSMUST00000221690 170 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 CT010480.3-201ENSMUST00000224712 259 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 AC123533.2-201ENSMUST00000228176 375 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Slc26a1-201ENSMUST00000051757 3812 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gfpt2-201ENSMUST00000020629 2947 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm21719-202ENSMUST00000189073 1358 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 D430018E03Rik-201ENSMUST00000181842 3832 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Ap3b2-201ENSMUST00000082090 3804 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Zfp551-201ENSMUST00000080348 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.06□□□□□ -1.12
Clp1Q99LI9 AW209491-201ENSMUST00000038690 2914 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Clp1Q99LI9 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Kcnma1-206ENSMUST00000163322 3162 ntTSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Pex5l-210ENSMUST00000193681 3620 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm4342-201ENSMUST00000118982 367 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm11708-201ENSMUST00000119530 832 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm13486-201ENSMUST00000119910 282 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm9378-201ENSMUST00000120315 471 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm13622-201ENSMUST00000120658 433 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm12929-201ENSMUST00000122406 370 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm22143-201ENSMUST00000157401 203 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm26353-201ENSMUST00000158224 255 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm23385-201ENSMUST00000158592 295 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm15740-201ENSMUST00000159703 1292 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm26505-201ENSMUST00000176208 166 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm27218-201ENSMUST00000183745 392 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm27178-201ENSMUST00000184962 340 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm8004-201ENSMUST00000187782 617 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm18980-201ENSMUST00000199098 1079 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm44212-201ENSMUST00000205016 897 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm44773-201ENSMUST00000207374 557 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm19709-201ENSMUST00000215403 482 ntBASIC8.05□□□□□ -1.12
Clp1Q99LI9 Olfr602-ps1-202ENSMUST00000218213 1169 ntTSL 5 BASIC8.05□□□□□ -1.12
Clp1Q99LI9 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Clp1Q99LI9 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC8.05□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms