Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Mir6973b-201ENSMUST00000184185 80 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm8058-201ENSMUST00000217247 587 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 CT009764.1-201ENSMUST00000222260 483 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 AC158750.1-201ENSMUST00000226163 634 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm43410-201ENSMUST00000197510 2234 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Mpv17l-203ENSMUST00000128757 3089 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Syne4Q8CII8 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.84□□□□□ -1.16
Syne4Q8CII8 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.16
Syne4Q8CII8 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.84□□□□□ -1.16
Syne4Q8CII8 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Syne4Q8CII8 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
Syne4Q8CII8 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.16
Syne4Q8CII8 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm11256-201ENSMUST00000118109 829 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm14202-201ENSMUST00000120121 311 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm12438-201ENSMUST00000122034 336 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm22552-201ENSMUST00000157796 337 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm6921-201ENSMUST00000161478 435 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm44471-201ENSMUST00000197963 100 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Lncbate1-201ENSMUST00000211953 812 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm3800-201ENSMUST00000221086 554 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Olfr282-201ENSMUST00000075851 928 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Olfr519-201ENSMUST00000084752 960 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm38300-201ENSMUST00000194245 1870 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.83□□□□□ -1.16
Syne4Q8CII8 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.83□□□□□ -1.16
Syne4Q8CII8 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm38263-201ENSMUST00000195879 3059 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Syne4Q8CII8 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm44286-201ENSMUST00000204098 1487 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm43618-201ENSMUST00000197392 3451 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 CT010577.1-202ENSMUST00000226187 1903 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm14733-201ENSMUST00000117680 133 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm11879-201ENSMUST00000121885 702 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm15300-201ENSMUST00000122324 279 ntBASIC7.82□□□□□ -1.16
Syne4Q8CII8 Gm25782-201ENSMUST00000122526 289 ntBASIC7.82□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms