Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Gm37730-201ENSMUST00000192432 2211 ntBASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 4930590J08Rik-203ENSMUST00000205686 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Gm13301-201ENSMUST00000121728 2446 ntBASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Gm37457-201ENSMUST00000193639 2433 ntBASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Rab11fip3Q8CHD8 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm30655-202ENSMUST00000222732 2808 ntTSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Teddm1b-201ENSMUST00000055314 2527 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 CT025535.2-201ENSMUST00000228572 7441 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm44130-201ENSMUST00000205157 3004 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm12468-201ENSMUST00000116189 404 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Rpl23a-ps2-201ENSMUST00000119375 474 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm6451-201ENSMUST00000121488 717 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm14847-201ENSMUST00000121978 519 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm13629-202ENSMUST00000152740 645 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm7289-201ENSMUST00000168993 734 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm27762-201ENSMUST00000183417 109 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm7663-201ENSMUST00000201151 1240 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm43377-201ENSMUST00000201640 455 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm8168-201ENSMUST00000209631 948 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 AC165349.1-201ENSMUST00000217896 424 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 CT009495.1-201ENSMUST00000224221 862 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 AC151730.1-201ENSMUST00000226106 448 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 AC154730.1-201ENSMUST00000227874 816 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 AC154484.2-201ENSMUST00000228359 818 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Adgrl3-206ENSMUST00000118034 4947 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm43497-201ENSMUST00000201137 2316 ntBASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Rab11fip3Q8CHD8 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC9.09□□□□□ -0.96
Rab11fip3Q8CHD8 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm5361-201ENSMUST00000211041 1498 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm19024-201ENSMUST00000194681 1319 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Olfr465-ps1-201ENSMUST00000206324 2234 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm18248-201ENSMUST00000191164 1846 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm37925-201ENSMUST00000195352 4255 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 CT010514.1-201ENSMUST00000214088 2969 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm16073-201ENSMUST00000116032 517 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Snord88a-201ENSMUST00000116723 90 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm14070-201ENSMUST00000120773 428 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm25395-201ENSMUST00000157343 272 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm24682-201ENSMUST00000158764 137 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm43063-201ENSMUST00000198198 1081 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 Gm7588-201ENSMUST00000216866 571 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 AC153152.2-201ENSMUST00000223165 959 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 AC154834.1-201ENSMUST00000224697 358 ntBASIC9.08□□□□□ -0.96
Rab11fip3Q8CHD8 AC154562.1-201ENSMUST00000226140 966 ntBASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms