Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim9Q8C7M3 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim9Q8C7M3 Tek-202ENSMUST00000073939 4549 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Trim9Q8C7M3 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim9Q8C7M3 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim9Q8C7M3 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Trim9Q8C7M3 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Ccdc32-202ENSMUST00000110833 732 ntTSL 2 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm15316-201ENSMUST00000121082 421 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm13179-202ENSMUST00000151994 978 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm21392-201ENSMUST00000182950 972 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm27360-201ENSMUST00000183487 80 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm29483-201ENSMUST00000188188 1078 ntTSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm35323-201ENSMUST00000191836 499 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm37493-201ENSMUST00000193167 433 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 AC115304.1-202ENSMUST00000226850 837 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm5446-201ENSMUST00000091762 784 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Rrh-201ENSMUST00000029648 1506 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm44620-201ENSMUST00000209183 2887 ntBASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
Trim9Q8C7M3 Meiob-201ENSMUST00000024972 1703 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm11590-201ENSMUST00000118999 1455 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm9874-202ENSMUST00000194957 1464 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm23527-201ENSMUST00000104570 130 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm12468-201ENSMUST00000116189 404 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm12242-201ENSMUST00000118824 738 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm4911-201ENSMUST00000119388 945 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm13487-201ENSMUST00000122240 864 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm6047-201ENSMUST00000167221 574 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Trim9Q8C7M3 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Ighv1-17-201ENSMUST00000194435 350 ntBASIC7.49□□□□□ -1.21
Trim9Q8C7M3 Gm8182-201ENSMUST00000197863 769 ntBASIC7.49□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms