Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm38203-201ENSMUST00000191815 245 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm37889-201ENSMUST00000194174 251 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm22711-202ENSMUST00000197029 135 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm43560-201ENSMUST00000198100 773 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm34783-201ENSMUST00000209159 303 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm45658-201ENSMUST00000209197 580 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm46317-201ENSMUST00000221103 393 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm5815-201ENSMUST00000050706 1185 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Olfr1276-201ENSMUST00000073322 939 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm29654-201ENSMUST00000186886 2169 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Kcnj15-208ENSMUST00000113862 5705 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Gm44553-201ENSMUST00000206316 2037 ntBASIC8.63□□□□□ -1.03
Trim47Q8C0E3 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC120347.1-201ENSMUST00000223326 1639 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm38104-201ENSMUST00000195121 1895 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm6327-201ENSMUST00000171185 1335 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm37066-201ENSMUST00000192713 2061 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC158686.1-201ENSMUST00000218068 2332 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm22439-201ENSMUST00000104048 132 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm24195-201ENSMUST00000116804 137 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Mir669e-201ENSMUST00000117003 119 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm13614-201ENSMUST00000117306 503 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm15233-201ENSMUST00000118747 400 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm14824-201ENSMUST00000119421 737 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm14450-201ENSMUST00000119984 240 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm15160-201ENSMUST00000120553 907 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm11385-201ENSMUST00000121513 570 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm26371-201ENSMUST00000157829 104 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm24130-201ENSMUST00000158536 151 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Mir3085-201ENSMUST00000175493 89 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm38097-201ENSMUST00000192936 439 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm37716-201ENSMUST00000193553 947 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm22149-202ENSMUST00000196259 137 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm42622-201ENSMUST00000197229 355 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm42976-201ENSMUST00000200313 222 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm8209-201ENSMUST00000206386 553 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm2225-201ENSMUST00000209570 377 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Slfn5os-202ENSMUST00000216469 550 ntTSL 5 BASIC8.62□□□□□ -1.03
Trim47Q8C0E3 Gm19007-201ENSMUST00000217746 874 ntBASIC8.62□□□□□ -1.03
Trim47Q8C0E3 AC121844.1-201ENSMUST00000218706 137 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms