Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Fam205a4-201ENSMUST00000108026 4130 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.97□□□□□ -1.29
Trub1Q8C0D0 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.96□□□□□ -1.29
Trub1Q8C0D0 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.96□□□□□ -1.29
Trub1Q8C0D0 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Trub1Q8C0D0 AC124421.1-201ENSMUST00000219114 4154 ntBASIC6.96□□□□□ -1.29
Trub1Q8C0D0 Olfr1183-202ENSMUST00000213115 8258 ntTSL 5 BASIC6.96□□□□□ -1.29
Trub1Q8C0D0 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
Trub1Q8C0D0 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.96□□□□□ -1.29
Trub1Q8C0D0 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.29
Trub1Q8C0D0 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm10555-201ENSMUST00000193178 1791 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm11858-201ENSMUST00000117935 838 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm22523-201ENSMUST00000158696 100 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm22533-201ENSMUST00000158821 274 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm23945-201ENSMUST00000179609 92 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 1110002O04Rik-201ENSMUST00000194261 566 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm7270-201ENSMUST00000195818 1128 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm44342-201ENSMUST00000196874 129 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm44383-201ENSMUST00000198940 129 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm45279-201ENSMUST00000210315 391 ntBASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Olfr1348-210ENSMUST00000214383 2582 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 1700015I17Rik-201ENSMUST00000209585 2099 ntTSL 5 BASIC6.96□□□□□ -1.3
Trub1Q8C0D0 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC122828.2-201ENSMUST00000222511 2880 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm15186-201ENSMUST00000119345 563 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm13877-201ENSMUST00000120614 417 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm23810-201ENSMUST00000175150 74 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm6489-201ENSMUST00000178167 696 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Mir6769b-201ENSMUST00000184793 60 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm34144-201ENSMUST00000197039 259 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm17822-201ENSMUST00000204307 351 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm4042-201ENSMUST00000216946 637 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC122327.2-201ENSMUST00000220883 120 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC122327.3-201ENSMUST00000221852 120 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC166341.1-201ENSMUST00000223360 105 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.95□□□□□ -1.3
Trub1Q8C0D0 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
Trub1Q8C0D0 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms